STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng06510DBnaCnng06510D protein. (296 aa)    
Predicted Functional Partners:
BnaC03g47130D
BnaC03g47130D protein.
    
 0.957
BnaA02g25600D
BnaA02g25600D protein.
  
 0.895
BnaC02g33400D
BnaC02g33400D protein.
  
 0.895
BnaA09g18400D
BnaA09g18400D protein.
  
 0.895
NF-YB2B
Transcription factor subunit NF-YB2B.
  
 0.895
BnaA06g35340D
BnaA06g35340D protein.
  
 0.892
BnaC09g20350D
BnaC09g20350D protein.
  
 0.892
BnaA09g18420D
BnaA09g18420D protein.
  
 0.892
NF-YB3A
Transcription factor subunit NF-YB3A.
  
 0.891
BnaA01g28350D
BnaA01g28350D protein.
  
 0.890
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.