STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g08030DBnaA02g08030D protein. (362 aa)    
Predicted Functional Partners:
BnaC05g04880D
BnaC05g04880D protein.
      
 0.499
BnaC09g11780D
BnaC09g11780D protein.
      
 0.474
BnaA09g11340D
BnaA09g11340D protein.
      
 0.474
BnaC05g00390D
BnaC05g00390D protein.
      
 0.473
BnaA06g35310D
BnaA06g35310D protein.
      
 0.473
BnaC01g37870D
BnaC01g37870D protein.
      
 0.473
BnaA01g29970D
BnaA01g29970D protein.
      
 0.473
BnaA01g22360D
BnaA01g22360D protein.
      
 0.472
BnaC01g28530D
BnaC01g28530D protein.
      
 0.472
BnaCnng09740D
BnaCnng09740D protein.
      
 0.471
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.