STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC01g36470DBnaC01g36470D protein. (42 aa)    
Predicted Functional Partners:
BnaA02g07730D
BnaA02g07730D protein.
     
 0.956
BnaA10g11990D
BnaA10g11990D protein.
     
 0.956
BnaC03g12430D
BnaC03g12430D protein.
     
 0.956
BnaC07g33060D
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.949
BnaA01g18450D
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.949
BnaCnng27780D
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.949
BnaC02g46710D
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.925
BnaC01g38270D
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.915
BnaA01g30320D
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.915
BnaC04g22440D
Citrate synthase; Belongs to the citrate synthase family.
     
 0.898
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.