STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g22050DBnaC09g22050D protein. (310 aa)    
Predicted Functional Partners:
BnaC02g46990D
BnaC02g46990D protein.
  
     0.524
BnaCnng05630D
BnaCnng05630D protein.
  
     0.523
BnaCnng59730D
BnaCnng59730D protein.
  
     0.513
BnaCnng66530D
BnaCnng66530D protein.
  
     0.512
BnaC09g42640D
BnaC09g42640D protein.
  
     0.511
BnaC09g37440D
BnaC09g37440D protein.
  
     0.510
BnaAnng29080D
BnaAnng29080D protein.
  
     0.510
BnaA03g56200D
BnaA03g56200D protein.
  
     0.506
BnaA03g51600D
BnaA03g51600D protein.
  
     0.504
BnaC09g21100D
BnaC09g21100D protein.
  
     0.503
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.