STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA06g36050DBnaA06g36050D protein. (70 aa)    
Predicted Functional Partners:
BnaA05g26760D
BnaA05g26760D protein.
    
 0.657
BnaC05g40780D
BnaC05g40780D protein.
    
 0.657
BnaA01g30730D
BnaA01g30730D protein.
    
 0.657
BnaCnng22290D
BnaCnng22290D protein.
    
 0.657
BnaCnng22930D
BnaCnng22930D protein.
    
 0.657
BnaA04g16160D
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.614
BnaC03g77050D
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.614
BnaA09g03810D
BnaA09g03810D protein; Belongs to the cyclin family.
    
 0.588
BnaC07g15060D
BnaC07g15060D protein; Belongs to the protein kinase superfamily.
   
 0.521
BnaA03g17950D
BnaA03g17950D protein; Belongs to the protein kinase superfamily.
   
 0.521
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.