STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g14450DSuperoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (213 aa)    
Predicted Functional Partners:
BnaA04g15200D
BnaA04g15200D protein.
   
 
 0.925
BnaC09g39060D
BnaC09g39060D protein.
  
 
 0.912
BnaC08g43520D
BnaC08g43520D protein.
   
 
 0.899
BnaA09g55440D
BnaA09g55440D protein.
   
   0.867
BnaCnng28550D
BnaCnng28550D protein.
   
   0.846
BnaA04g26680D
BnaA04g26680D protein.
   
 
 0.844
BnaC04g00860D
BnaC04g00860D protein.
   
 
 0.844
BnaAnng10790D
BnaAnng10790D protein.
   
   0.843
BnaA06g16180D
BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.840
BnaAnng19390D
BnaAnng19390D protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.840
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.