STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g47470DBnaA09g47470D protein. (221 aa)    
Predicted Functional Partners:
BnaA09g26530D
BnaA09g26530D protein.
  
   
 0.594
BnaA08g27360D
BnaA08g27360D protein.
   
 
 0.575
BnaA05g09330D
BnaA05g09330D protein.
  
   
 0.541
BnaA08g29340D
BnaA08g29340D protein.
  
 
  0.524
BnaC06g40320D
BnaC06g40320D protein.
  
 
 0.519
BnaC08g49570D
BnaC08g49570D protein.
  
    0.513
BnaA09g27440D
BnaA09g27440D protein.
  
   0.509
BnaC08g21670D
BnaC08g21670D protein.
  
     0.508
BnaA04g15080D
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
   
 
 0.508
BnaA07g10200D
BnaA07g10200D protein.
  
    0.507
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.