STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g32910DBnaA01g32910D protein. (856 aa)    
Predicted Functional Partners:
BnaC03g66410D
BnaC03g66410D protein.
  
  
 0.926
BnaA08g11450D
BnaA08g11450D protein.
  
  
 0.926
BnaA01g21560D
BnaA01g21560D protein.
  
 0.902
BnaC09g15600D
BnaC09g15600D protein.
  
 0.902
BnaA09g14970D
BnaA09g14970D protein.
  
 0.902
BnaC01g27670D
BnaC01g27670D protein.
  
 0.902
BnaC03g59920D
BnaC03g59920D protein.
     
 
0.900
BnaA03g19010D
BnaA03g19010D protein.
   
 0.881
BnaC04g04870D
BnaC04g04870D protein.
   
 0.881
BnaCnng60350D
BnaCnng60350D protein.
   
 0.881
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.