STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g09610DBnaC02g09610D protein. (192 aa)    
Predicted Functional Partners:
BnaA06g33160D
BnaA06g33160D protein.
  
   
 0.565
BnaA01g05840D
BnaA01g05840D protein.
      
 0.465
BnaC04g52490D
BnaC04g52490D protein.
      
 0.465
BnaA03g55880D
BnaA03g55880D protein.
      
 0.406
BnaCnng37300D
BnaCnng37300D protein.
  
     0.404
BnaC02g25900D
BnaC02g25900D protein.
      
 0.400
BnaA02g19300D
BnaA02g19300D protein.
      
 0.400
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.