STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g48000DBnaA09g48000D protein. (97 aa)    
Predicted Functional Partners:
BnaA02g05570D
RuvB-like helicase; Belongs to the RuvB family.
    
 0.783
BnaC02g09460D
RuvB-like helicase; Belongs to the RuvB family.
    
 0.783
BnaC05g14140D
BnaC05g14140D protein; Belongs to the actin family.
   
 0.761
BnaA06g12580D
BnaA06g12580D protein; Belongs to the actin family.
   
 0.761
BnaA05g26700D
BnaA05g26700D protein; Belongs to the actin family.
    
 0.758
BnaC05g40720D
BnaC05g40720D protein; Belongs to the actin family.
    
 0.758
BnaA03g18330D
BnaA03g18330D protein.
  
0.751
BnaC03g21850D
BnaC03g21850D protein.
  
0.751
BnaA04g18350D
BnaA04g18350D protein.
   
 0.716
BnaC08g45280D
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.705
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.