STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g11550DBnaA09g11550D protein. (569 aa)    
Predicted Functional Partners:
BnaA09g30910D
BnaA09g30910D protein.
    
 0.972
BnaC05g17700D
BnaC05g17700D protein.
    
 0.972
BnaC08g20170D
BnaC08g20170D protein.
    
 0.972
BnaC02g01780D
BnaC02g01780D protein.
    
 0.968
BnaA05g26790D
BnaA05g26790D protein.
    
 0.940
BnaA01g30760D
BnaA01g30760D protein.
    
 0.940
BnaA08g20970D
BnaA08g20970D protein.
    
 
 0.925
BnaA06g24140D
BnaA06g24140D protein.
    
 0.867
BnaC02g43620D
BnaC02g43620D protein.
    
 0.867
BnaAnng04720D
BnaAnng04720D protein.
    
 0.867
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.