Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC08g42220DBnaC08g42220D protein. (624 aa)    
Predicted Functional Partners:
BnaA09g40950D
BnaA09g40950D protein.
   
 
 0.717
BnaA09g15260D
BnaA09g15260D protein.
     
 0.690
BnaA01g12490D
BnaA01g12490D protein.
   
  
 0.678
BnaA09g15170D
BnaA09g15170D protein.
      
 0.634
BnaC03g47210D
BnaC03g47210D protein.
     
 0.617
BnaC03g60720D
BnaC03g60720D protein.
    
 0.614
BnaA04g15210D
Oleosin.
      
 0.607
BnaCnng02970D
BnaCnng02970D protein.
      
 0.595
BnaA03g00800D
BnaA03g00800D protein.
      
 0.595
BnaC09g38300D
BnaC09g38300D protein.
      
 0.590
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.