STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g00900DBnaA07g00900D protein. (139 aa)    
Predicted Functional Partners:
BnaCnng35710D
BnaCnng35710D protein.
  
  
  0.554
BnaA02g18650D
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
  
    0.540
BnaC06g24760D
BnaC06g24760D protein.
  
     0.538
BnaC07g16170D
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
  
    0.536
BnaC06g12300D
BnaC06g12300D protein.
  
     0.536
BnaC01g44710D
BnaC01g44710D protein.
  
   
 0.535
BnaA06g20020D
BnaA06g20020D protein.
  
     0.534
BnaC09g42380D
BnaC09g42380D protein.
  
     0.532
BnaC04g54600D
BnaC04g54600D protein.
  
   
 0.532
BnaC06g03940D
BnaC06g03940D protein.
  
     0.531
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.