Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g27660D | BnaA02g09890D | A0A078HDS0 | A0A078GUN9 | BnaA01g27660D protein. | BnaA02g09890D protein. | 0.795 |
BnaA01g27660D | BnaA04g27040D | A0A078HDS0 | A0A078INA8 | BnaA01g27660D protein. | BnaA04g27040D protein. | 0.838 |
BnaA01g27660D | BnaA06g25230D | A0A078HDS0 | A0A078GVQ2 | BnaA01g27660D protein. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.672 |
BnaA01g27660D | BnaA06g38260D | A0A078HDS0 | A0A078IU30 | BnaA01g27660D protein. | Fumarylacetoacetase. | 0.941 |
BnaA01g27660D | BnaA10g07180D | A0A078HDS0 | A0A078FN65 | BnaA01g27660D protein. | BnaA10g07180D protein. | 0.795 |
BnaA01g27660D | BnaC02g13840D | A0A078HDS0 | A0A078HVB1 | BnaA01g27660D protein. | BnaC02g13840D protein. | 0.795 |
BnaA01g27660D | BnaC04g51220D | A0A078HDS0 | A0A078GQ98 | BnaA01g27660D protein. | BnaC04g51220D protein. | 0.838 |
BnaA01g27660D | BnaC04g51900D | A0A078HDS0 | A0A078IZ95 | BnaA01g27660D protein. | BnaC04g51900D protein. | 0.838 |
BnaA01g27660D | BnaC05g49430D | A0A078HDS0 | A0A078JA90 | BnaA01g27660D protein. | Fumarylacetoacetase. | 0.941 |
BnaA01g27660D | BnaCnng14590D | A0A078HDS0 | A0A078I7B1 | BnaA01g27660D protein. | BnaCnng14590D protein. | 0.795 |
BnaA02g09890D | BnaA01g27660D | A0A078GUN9 | A0A078HDS0 | BnaA02g09890D protein. | BnaA01g27660D protein. | 0.795 |
BnaA02g09890D | BnaA06g38260D | A0A078GUN9 | A0A078IU30 | BnaA02g09890D protein. | Fumarylacetoacetase. | 0.874 |
BnaA02g09890D | BnaC02g13840D | A0A078GUN9 | A0A078HVB1 | BnaA02g09890D protein. | BnaC02g13840D protein. | 0.900 |
BnaA02g09890D | BnaC05g49430D | A0A078GUN9 | A0A078JA90 | BnaA02g09890D protein. | Fumarylacetoacetase. | 0.875 |
BnaA04g27040D | BnaA01g27660D | A0A078INA8 | A0A078HDS0 | BnaA04g27040D protein. | BnaA01g27660D protein. | 0.838 |
BnaA04g27040D | BnaA06g25230D | A0A078INA8 | A0A078GVQ2 | BnaA04g27040D protein. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.929 |
BnaA04g27040D | BnaA06g38260D | A0A078INA8 | A0A078IU30 | BnaA04g27040D protein. | Fumarylacetoacetase. | 0.838 |
BnaA04g27040D | BnaC04g51220D | A0A078INA8 | A0A078GQ98 | BnaA04g27040D protein. | BnaC04g51220D protein. | 0.900 |
BnaA04g27040D | BnaC04g51900D | A0A078INA8 | A0A078IZ95 | BnaA04g27040D protein. | BnaC04g51900D protein. | 0.900 |
BnaA04g27040D | BnaC05g49430D | A0A078INA8 | A0A078JA90 | BnaA04g27040D protein. | Fumarylacetoacetase. | 0.838 |
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