STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g09350DBnaC02g09350D protein. (346 aa)    
Predicted Functional Partners:
BnaC06g12340D
BnaC06g12340D protein.
  
 
  0.556
BnaA09g47990D
BnaA09g47990D protein.
  
 
  0.550
BnaA09g16330D
BnaA09g16330D protein.
  
 
  0.548
BnaC04g44540D
BnaC04g44540D protein.
  
 
  0.548
BnaC02g22790D
BnaC02g22790D protein.
  
 
  0.542
BnaC09g18270D
BnaC09g18270D protein.
  
     0.526
BnaCnng30890D
BnaCnng30890D protein.
  
     0.526
BnaCnng74640D
BnaCnng74640D protein.
  
     0.526
BnaC04g11620D
BnaC04g11620D protein.
  
     0.522
BnaA09g03210D
BnaA09g03210D protein.
  
     0.520
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.