Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g58600DBnaC03g58600D protein; Belongs to the protein kinase superfamily. (464 aa)    
Predicted Functional Partners:
BnaA05g20080D
BnaA05g20080D protein; Belongs to the protein kinase superfamily.
  
   
 0.809
BnaA09g04970D
BnaA09g04970D protein; Belongs to the PI3/PI4-kinase family.
    
 0.704
BnaC06g18300D
BnaC06g18300D protein.
  
  
0.669
BnaA09g39530D
BnaA09g39530D protein.
  
  
0.667
BnaC06g14210D
BnaC06g14210D protein.
      
 0.642
BnaC06g14200D
BnaC06g14200D protein.
      
 0.642
BnaA06g02470D
BnaA06g02470D protein; Belongs to the protein kinase superfamily.
  
   
 0.642
BnaA02g36230D
BnaA02g36230D protein.
      
 0.635
BnaCnng72980D
BnaCnng72980D protein.
      
 0.635
BnaC06g04410D
BnaC06g04410D protein; Belongs to the protein kinase superfamily.
  
   
 0.630
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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