STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng07670DBnaCnng07670D protein. (103 aa)    
Predicted Functional Partners:
BnaA09g41080D
BnaA09g41080D protein.
   
  
 0.626
BnaAnng26280D
BnaAnng26280D protein.
  
   
 0.625
BnaC03g66650D
BnaC03g66650D protein.
  
     0.541
BnaAnng31670D
BnaAnng31670D protein.
  
     0.541
BnaA04g12440D
BnaA04g12440D protein.
  
     0.538
BnaA10g03430D
BnaA10g03430D protein.
  
     0.536
BnaA09g42920D
BnaA09g42920D protein.
  
     0.535
BnaC01g00310D
BnaC01g00310D protein.
  
     0.535
BnaC04g12490D
BnaC04g12490D protein.
  
     0.534
BnaA05g10770D
BnaA05g10770D protein.
  
     0.534
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.