STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g00830DBnaA07g00830D protein. (130 aa)    
Predicted Functional Partners:
BnaC07g31300D
BnaC07g31300D protein.
   
 0.516
BnaC05g47430D
BnaC05g47430D protein.
   
 0.499
BnaA05g33180D
BnaA05g33180D protein.
   
 0.499
BnaC05g02690D
BnaC05g02690D protein.
      
 0.497
BnaA06g19800D
BnaA06g19800D protein.
   
  
 0.479
BnaA04g28420D
BnaA04g28420D protein.
      
 0.470
BnaC07g16580D
BnaC07g16580D protein.
      
 0.432
BnaC02g43970D
BnaC02g43970D protein.
      
 0.432
BnaA02g34690D
BnaA02g34690D protein.
      
 0.432
BnaA07g37460D
BnaA07g37460D protein.
      
 0.432
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.