STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g14840DBnaA04g14840D protein. (129 aa)    
Predicted Functional Partners:
BnaC03g15720D
BnaC03g15720D protein.
  
  
 0.596
BnaA04g13590D
BnaA04g13590D protein.
  
   
 0.564
BnaA09g10730D
BnaA09g10730D protein.
  
    0.559
BnaAnng13220D
BnaAnng13220D protein.
  
  
 0.542
BnaC04g53380D
BnaC04g53380D protein.
  
  
 0.541
BnaA08g12710D
BnaA08g12710D protein.
  
 
  0.540
BnaCnng75020D
BnaCnng75020D protein.
  
  
 0.539
BnaCnng49280D
BnaCnng49280D protein.
  
    0.537
BnaC01g34730D
BnaC01g34730D protein.
  
     0.536
BnaA08g30930D
BnaA08g30930D protein.
  
    0.535
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.