Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g29460DBnaA05g29460D protein. (560 aa)    
Predicted Functional Partners:
BnaAnng02750D
BnaAnng02750D protein.
    
 0.625
BnaA09g43570D
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
      
 0.537
BnaC03g67170D
BnaC03g67170D protein.
     
 0.509
BnaC03g67190D
BnaC03g67190D protein.
     
 0.509
BnaA08g30650D
BnaA08g30650D protein.
     
 0.509
BnaA03g00600D
BnaA03g00600D protein.
    
 0.503
BnaCnng03290D
BnaCnng03290D protein.
    
 0.503
BnaCnng28720D
BnaCnng28720D protein.
    
 0.503
BnaC03g74970D
BnaC03g74970D protein.
      
 0.485
BnaC03g29440D
BnaC03g29440D protein.
    
 
 0.456
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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