STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g32940DBnaC04g32940D protein. (841 aa)    
Predicted Functional Partners:
BnaAnng14600D
Structural maintenance of chromosomes protein.
   
 0.988
BnaC03g72770D
Structural maintenance of chromosomes protein.
   
 0.988
BnaC04g26140D
BnaC04g26140D protein.
   
 0.976
BnaC04g26130D
BnaC04g26130D protein.
   
 0.976
BnaA10g29340D
BnaA10g29340D protein.
   
 0.950
BnaC09g42330D
BnaC09g42330D protein.
   
 0.933
BnaC09g42410D
Sister chromatid cohesion protein.
   
 0.933
BnaC09g42310D
BnaC09g42310D protein.
   
 0.933
BnaC02g01490D
BnaC02g01490D protein.
   
 0.867
BnaAnng06390D
BnaAnng06390D protein.
   
 0.867
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.