STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g26390DMethyltransferase. (628 aa)    
Predicted Functional Partners:
BnaCnng11130D
BnaCnng11130D protein.
  
 
   0.551
BnaUnng00150D
BnaUnng00150D protein.
  
    0.550
BnaA04g14200D
BnaA04g14200D protein.
  
    0.550
BnaC02g19240D
BnaC02g19240D protein.
  
 
   0.549
BnaA09g00920D
BnaA09g00920D protein.
  
    0.546
BnaC08g08930D
BnaC08g08930D protein.
  
     0.545
BnaA04g12150D
BnaA04g12150D protein.
  
     0.543
BnaC03g16510D
BnaC03g16510D protein.
  
     0.543
BnaC03g69410D
BnaC03g69410D protein.
  
     0.542
BnaCnng13860D
BnaCnng13860D protein.
  
     0.542
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.