STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA06g17040DBnaA06g17040D protein. (646 aa)    
Predicted Functional Partners:
BnaC05g51320D
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
  
   
 0.644
BnaC03g59080D
Methyltransferase.
  
  
  0.500
BnaA02g29510D
BnaA02g29510D protein.
  
  
  0.500
BnaC09g43110D
BnaC09g43110D protein.
    
 
 0.495
BnaCnng42580D
BnaCnng42580D protein.
      
 0.495
BnaC04g53600D
BnaC04g53600D protein.
      
 0.495
BnaC08g20100D
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
  
   
 0.494
BnaA09g41000D
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
      
 0.493
BnaC08g49080D
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
      
 0.493
BnaC03g76010D
Methyltransferase.
  
  
  0.489
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.