Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g22250D | BnaA04g29590D | A0A078GGQ6 | A0A078E3A7 | BnaA01g22250D protein. | Small nuclear ribonucleoprotein Sm D2. | 0.852 |
BnaA01g22250D | BnaA09g01330D | A0A078GGQ6 | A0A078G9S8 | BnaA01g22250D protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.904 |
BnaA01g22250D | BnaA10g17280D | A0A078GGQ6 | A0A078HIZ8 | BnaA01g22250D protein. | BnaA10g17280D protein. | 0.936 |
BnaA01g22250D | BnaC01g24280D | A0A078GGQ6 | A0A078GGF0 | BnaA01g22250D protein. | Small nuclear ribonucleoprotein G. | 0.783 |
BnaA01g22250D | BnaC03g63890D | A0A078GGQ6 | A0A078GY62 | BnaA01g22250D protein. | Small nuclear ribonucleoprotein-associated protein. | 0.929 |
BnaA01g22250D | BnaC03g73150D | A0A078GGQ6 | A0A078IXM8 | BnaA01g22250D protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.904 |
BnaA01g22250D | BnaC04g56220D | A0A078GGQ6 | A0A078JES5 | BnaA01g22250D protein. | Small nuclear ribonucleoprotein G. | 0.783 |
BnaA01g22250D | BnaC06g18620D | A0A078GGQ6 | A0A078GF75 | BnaA01g22250D protein. | Small nuclear ribonucleoprotein Sm D2. | 0.852 |
BnaA01g22250D | BnaC09g00490D | A0A078GGQ6 | A0A078GB77 | BnaA01g22250D protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.904 |
BnaA01g22260D | BnaA04g29590D | A0A078GHA1 | A0A078E3A7 | BnaA01g22260D protein. | Small nuclear ribonucleoprotein Sm D2. | 0.852 |
BnaA01g22260D | BnaA09g01330D | A0A078GHA1 | A0A078G9S8 | BnaA01g22260D protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.904 |
BnaA01g22260D | BnaA10g17280D | A0A078GHA1 | A0A078HIZ8 | BnaA01g22260D protein. | BnaA10g17280D protein. | 0.936 |
BnaA01g22260D | BnaC01g24280D | A0A078GHA1 | A0A078GGF0 | BnaA01g22260D protein. | Small nuclear ribonucleoprotein G. | 0.783 |
BnaA01g22260D | BnaC03g63890D | A0A078GHA1 | A0A078GY62 | BnaA01g22260D protein. | Small nuclear ribonucleoprotein-associated protein. | 0.929 |
BnaA01g22260D | BnaC03g73150D | A0A078GHA1 | A0A078IXM8 | BnaA01g22260D protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.904 |
BnaA01g22260D | BnaC04g56220D | A0A078GHA1 | A0A078JES5 | BnaA01g22260D protein. | Small nuclear ribonucleoprotein G. | 0.783 |
BnaA01g22260D | BnaC06g18620D | A0A078GHA1 | A0A078GF75 | BnaA01g22260D protein. | Small nuclear ribonucleoprotein Sm D2. | 0.852 |
BnaA01g22260D | BnaC09g00490D | A0A078GHA1 | A0A078GB77 | BnaA01g22260D protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.904 |
BnaA04g29590D | BnaA01g22250D | A0A078E3A7 | A0A078GGQ6 | Small nuclear ribonucleoprotein Sm D2. | BnaA01g22250D protein. | 0.852 |
BnaA04g29590D | BnaA01g22260D | A0A078E3A7 | A0A078GHA1 | Small nuclear ribonucleoprotein Sm D2. | BnaA01g22260D protein. | 0.852 |
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