STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng05120DBnaAnng05120D protein. (215 aa)    
Predicted Functional Partners:
BnaAnng04050D
BnaAnng04050D protein.
  
   
 0.523
BnaA07g00650D
BnaA07g00650D protein.
    
 0.517
BnaA03g18330D
BnaA03g18330D protein.
    
 0.512
BnaC03g21850D
BnaC03g21850D protein.
    
 0.512
BnaC03g24400D
BnaC03g24400D protein.
  
 
  0.508
BnaC09g52500D
BnaC09g52500D protein.
  
    0.506
BnaA07g04030D
BnaA07g04030D protein.
    
   0.476
BnaAnng34330D
BnaAnng34330D protein.
  
 
 0.471
BnaC05g12590D
BnaC05g12590D protein.
      
 0.470
BnaCnng28580D
BnaCnng28580D protein.
      
 0.470
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.