STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g28720DBnaA07g28720D protein; Belongs to the cyclin family. (319 aa)    
Predicted Functional Partners:
BnaA05g26760D
BnaA05g26760D protein.
    
 0.692
BnaC05g40780D
BnaC05g40780D protein.
    
 0.692
BnaA01g30730D
BnaA01g30730D protein.
    
 0.692
BnaCnng22290D
BnaCnng22290D protein.
    
 0.692
BnaCnng22930D
BnaCnng22930D protein.
    
 0.692
BnaA06g01400D
BnaA06g01400D protein.
   
 0.675
BnaAnng30910D
BnaAnng30910D protein.
   
 0.675
BnaAnng07700D
BnaAnng07700D protein.
    
 0.666
BnaCnng49920D
BnaCnng49920D protein; Belongs to the protein kinase superfamily.
   
 0.661
BnaCnng55310D
BnaCnng55310D protein; Belongs to the protein kinase superfamily.
   
 0.661
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.