STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng04950DBnaAnng04950D protein. (304 aa)    
Predicted Functional Partners:
BnaA03g18970D
BnaA03g18970D protein.
  
     0.522
BnaC03g72510D
BnaC03g72510D protein.
  
     0.520
BnaA01g27570D
BnaA01g27570D protein.
  
     0.505
BnaC01g35070D
BnaC01g35070D protein.
  
     0.504
BnaCnng27900D
BnaCnng27900D protein.
  
     0.503
BnaC04g55700D
BnaC04g55700D protein.
  
     0.502
BnaAnng09570D
BnaAnng09570D protein.
  
     0.490
BnaC05g09160D
BnaC05g09160D protein.
  
     0.483
BnaC03g66140D
BnaC03g66140D protein.
  
     0.482
BnaC09g43740D
BnaC09g43740D protein.
  
     0.473
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.