Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g11730DBnaA09g11730D protein. (894 aa)    
Predicted Functional Partners:
BnaA07g00650D
BnaA07g00650D protein.
    
 0.767
BnaA03g18330D
BnaA03g18330D protein.
    
 0.687
BnaC03g21850D
BnaC03g21850D protein.
    
 0.687
BnaA07g04030D
BnaA07g04030D protein.
    
   0.549
BnaA05g13650D
BnaA05g13650D protein.
    
 0.543
BnaC08g44000D
BnaC08g44000D protein.
    
 0.543
BnaC04g29240D
BnaC04g29240D protein.
    
 0.543
BnaA08g28100D
BnaA08g28100D protein.
    
 0.543
BnaC05g02890D
BnaC05g02890D protein.
    
 0.543
BnaC05g40000D
BnaC05g40000D protein.
    
 0.543
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.