STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g17340DBnaA02g17340D protein. (555 aa)    
Predicted Functional Partners:
BnaA05g18180D
BnaA05g18180D protein.
    
 0.775
BnaAnng41230D
BnaAnng41230D protein.
    
 0.775
BnaC04g51250D
BnaC04g51250D protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.774
BnaC04g51920D
BnaC04g51920D protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.774
BnaC04g51790D
BnaC04g51790D protein.
   
 0.774
BnaA05g31950D
BnaA05g31950D protein.
    
 0.739
BnaC01g26690D
BnaC01g26690D protein.
    
 0.704
BnaA06g24690D
BnaA06g24690D protein.
    
 0.659
BnaCnng13320D
BnaCnng13320D protein.
    
 0.659
BnaC01g21230D
BnaC01g21230D protein.
   
 0.638
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.