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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g23180DBnaC02g23180D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (358 aa)    
Predicted Functional Partners:
BnaC05g01200D
BnaC05g01200D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.755
BnaA08g27130D
BnaA08g27130D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.754
BnaC04g02480D
BnaC04g02480D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.754
BnaA05g17600D
BnaA05g17600D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.753
BnaAnng21090D
BnaAnng21090D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.752
BnaCnng35700D
BnaCnng35700D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.735
BnaAnng19660D
BnaAnng19660D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.735
BnaA09g13940D
BnaA09g13940D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.734
BnaA01g35230D
BnaA01g35230D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.731
BnaA05g09290D
BnaA05g09290D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.730
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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