Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g15190DBnaC04g15190D protein. (457 aa)    
Predicted Functional Partners:
BnaC04g04100D
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
      
 0.582
BnaC04g04110D
BnaC04g04110D protein.
      
 0.582
BnaA07g32030D
BnaA07g32030D protein.
      
 0.552
BnaC03g16550D
BnaC03g16550D protein.
  
  
0.535
BnaA05g12320D
BnaA05g12320D protein; Belongs to the protein kinase superfamily.
  
  
0.529
BnaA09g05680D
BnaA09g05680D protein.
    
 
 0.519
BnaAnng26580D
BnaAnng26580D protein.
    
 
 0.519
BnaCnng75810D
BnaCnng75810D protein.
    
 
 0.519
BnaA03g51000D
BnaA03g51000D protein.
     
 0.507
BnaA07g24800D
BnaA07g24800D protein.
      
 0.498
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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