STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g23250DBnaC02g23250D protein. (211 aa)    
Predicted Functional Partners:
BnaA01g35630D
BnaA01g35630D protein.
  
     0.517
BnaA02g28200D
BnaA02g28200D protein.
  
     0.516
BnaC02g36290D
BnaC02g36290D protein.
  
     0.515
BnaA10g17300D
BnaA10g17300D protein.
  
     0.510
BnaA07g04520D
BnaA07g04520D protein.
  
     0.508
BnaAnng02390D
BnaAnng02390D protein.
  
     0.504
BnaC01g42430D
BnaC01g42430D protein.
  
     0.501
BnaC02g34710D
BnaC02g34710D protein.
  
     0.500
BnaC05g44160D
BnaC05g44160D protein.
  
     0.499
BnaC03g49030D
BnaC03g49030D protein.
  
     0.497
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.