STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g17100DBnaA10g17100D protein. (402 aa)    
Predicted Functional Partners:
BnaC09g46720D
BnaC09g46720D protein.
      
 0.469
BnaC05g09650D
BnaC05g09650D protein.
      
 0.469
BnaA09g40900D
BnaA09g40900D protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.467
BnaA07g01280D
BnaA07g01280D protein.
      
 0.465
BnaC09g51030D
BnaC09g51030D protein.
      
 0.465
BnaC09g43670D
BnaC09g43670D protein.
      
 0.431
BnaA08g02750D
BnaA08g02750D protein.
      
 0.431
BnaC06g40660D
ADP,ATP carrier protein.
      
 0.403
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.