Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g23090D | BnaA09g34820D | A0A078I7X2 | A0A078HNS6 | BnaA01g23090D protein. | BnaA09g34820D protein. | 0.518 |
BnaA04g11000D | BnaA06g24800D | A0A078HSM8 | A0A078F6R8 | BnaA04g11000D protein; Belongs to the NOB1 family. | BnaA06g24800D protein. | 0.508 |
BnaA04g11000D | BnaA09g34820D | A0A078HSM8 | A0A078HNS6 | BnaA04g11000D protein; Belongs to the NOB1 family. | BnaA09g34820D protein. | 0.779 |
BnaA04g11000D | BnaAnng06080D | A0A078HSM8 | A0A078HQ79 | BnaA04g11000D protein; Belongs to the NOB1 family. | BnaAnng06080D protein. | 0.771 |
BnaA04g11000D | BnaC04g32670D | A0A078HSM8 | A0A078HG17 | BnaA04g11000D protein; Belongs to the NOB1 family. | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | 0.860 |
BnaA04g11000D | BnaC04g33060D | A0A078HSM8 | A0A078I8H3 | BnaA04g11000D protein; Belongs to the NOB1 family. | BnaC04g33060D protein; Belongs to the NOB1 family. | 0.543 |
BnaA04g11000D | BnaC06g42290D | A0A078HSM8 | A0A078JKV7 | BnaA04g11000D protein; Belongs to the NOB1 family. | BnaC06g42290D protein. | 0.549 |
BnaA04g11000D | BnaCnng21620D | A0A078HSM8 | A0A078IQ08 | BnaA04g11000D protein; Belongs to the NOB1 family. | BnaCnng21620D protein. | 0.508 |
BnaA06g19140D | BnaA06g24800D | A0A078HM23 | A0A078F6R8 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaA06g24800D protein. | 0.621 |
BnaA06g19140D | BnaA09g34820D | A0A078HM23 | A0A078HNS6 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaA09g34820D protein. | 0.612 |
BnaA06g19140D | BnaCnng21620D | A0A078HM23 | A0A078IQ08 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaCnng21620D protein. | 0.621 |
BnaA06g24800D | BnaA04g11000D | A0A078F6R8 | A0A078HSM8 | BnaA06g24800D protein. | BnaA04g11000D protein; Belongs to the NOB1 family. | 0.508 |
BnaA06g24800D | BnaA06g19140D | A0A078F6R8 | A0A078HM23 | BnaA06g24800D protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.621 |
BnaA06g24800D | BnaA09g34820D | A0A078F6R8 | A0A078HNS6 | BnaA06g24800D protein. | BnaA09g34820D protein. | 0.559 |
BnaA06g24800D | BnaAnng06080D | A0A078F6R8 | A0A078HQ79 | BnaA06g24800D protein. | BnaAnng06080D protein. | 0.513 |
BnaA06g24800D | BnaC04g32670D | A0A078F6R8 | A0A078HG17 | BnaA06g24800D protein. | Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. | 0.638 |
BnaA06g24800D | BnaC04g33060D | A0A078F6R8 | A0A078I8H3 | BnaA06g24800D protein. | BnaC04g33060D protein; Belongs to the NOB1 family. | 0.508 |
BnaA06g24800D | BnaC06g42290D | A0A078F6R8 | A0A078JKV7 | BnaA06g24800D protein. | BnaC06g42290D protein. | 0.508 |
BnaA06g24800D | BnaC09g39320D | A0A078F6R8 | A0A078GJQ8 | BnaA06g24800D protein. | BnaC09g39320D protein. | 0.508 |
BnaA09g34820D | BnaA01g23090D | A0A078HNS6 | A0A078I7X2 | BnaA09g34820D protein. | BnaA01g23090D protein. | 0.518 |
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