STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g16750DBnaA10g16750D protein. (97 aa)    
Predicted Functional Partners:
BnaC08g47690D
BnaC08g47690D protein.
  
     0.524
BnaA02g12200D
BnaA02g12200D protein; Belongs to the glycosyl hydrolase 28 family.
  
     0.518
BnaA03g57910D
BnaA03g57910D protein.
  
     0.517
BnaA09g05420D
BnaA09g05420D protein.
  
     0.516
BnaA04g16020D
BnaA04g16020D protein.
  
     0.514
BnaAnng06670D
BnaAnng06670D protein.
  
     0.514
BnaC05g08800D
BnaC05g08800D protein.
  
     0.513
BnaCnng58590D
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
     0.512
BnaA02g36360D
BnaA02g36360D protein.
  
     0.511
BnaC07g49860D
BnaC07g49860D protein.
  
     0.511
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.