STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g21750DBnaC09g21750D protein. (372 aa)    
Predicted Functional Partners:
BnaC07g03320D
BnaC07g03320D protein.
   
 0.996
BnaC05g11770D
BnaC05g11770D protein.
  
 0.996
BnaA03g01910D
BnaA03g01910D protein.
  
 0.995
BnaA08g13850D
BnaA08g13850D protein.
   
 0.995
BnaA09g03590D
BnaA09g03590D protein.
   
 0.994
BnaC03g30050D
BnaC03g30050D protein.
  
 0.994
BnaC09g42110D
BnaC09g42110D protein.
   
 0.994
BnaC02g39570D
BnaC02g39570D protein.
   
 0.994
BnaAnng11410D
BnaAnng11410D protein.
   
 0.994
BnaAnng21570D
BnaAnng21570D protein.
   
 0.993
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.