STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g27280DBnaA10g27280D protein. (73 aa)    
Predicted Functional Partners:
BnaA07g25240D
BnaA07g25240D protein.
  
 
  0.586
BnaC06g27010D
BnaC06g27010D protein.
  
 
  0.585
BnaA09g15470D
BnaA09g15470D protein.
  
     0.543
BnaC03g30100D
BnaC03g30100D protein.
  
     0.531
BnaA09g43580D
BnaA09g43580D protein.
  
     0.527
BnaCnng30320D
BnaCnng30320D protein.
  
     0.526
BnaAnng37590D
BnaAnng37590D protein.
  
   
 0.522
BnaC03g60930D
BnaC03g60930D protein.
  
   
 0.521
BnaC01g20720D
BnaC01g20720D protein.
  
     0.516
BnaC05g31900D
BnaC05g31900D protein.
  
     0.516
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.