STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g27180DBnaA10g27180D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (610 aa)    
Predicted Functional Partners:
BnaC09g21670D
BnaC09g21670D protein.
   
 0.633
BnaC03g59790D
BnaC03g59790D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
0.473
BnaC04g28810D
BnaC04g28810D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
0.471
BnaCnng17220D
BnaCnng17220D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
0.471
BnaC09g40940D
BnaC09g40940D protein.
      
 0.469
BnaC09g40950D
BnaC09g40950D protein.
      
 0.469
BnaC02g06950D
BnaC02g06950D protein.
      
 0.469
BnaA03g54880D
BnaA03g54880D protein.
      
 0.437
BnaCnng40400D
BnaA10g27170D protein.
      
 0.437
BnaCnng24620D
BnaCnng24620D protein.
  
 0.431
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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