STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g60710DBnaC03g60710D protein. (449 aa)    
Predicted Functional Partners:
BnaCnng36100D
BnaCnng36100D protein.
  
     0.533
BnaC01g41700D
BnaC01g41700D protein.
  
     0.525
BnaA09g06740D
BnaA09g06740D protein.
  
     0.523
BnaA06g23330D
BnaA06g23330D protein.
  
     0.521
BnaA01g35330D
BnaA01g35330D protein.
  
     0.520
BnaA05g17850D
BnaA05g17850D protein.
  
     0.519
BnaA06g40030D
BnaA06g40030D protein.
  
     0.519
BnaC07g34270D
BnaC07g34270D protein.
  
     0.518
BnaA03g51920D
BnaA03g51920D protein.
  
     0.516
BnaCnng73030D
BnaCnng73030D protein.
  
     0.510
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.