STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC08g26530DBnaC08g26530D protein. (115 aa)    
Predicted Functional Partners:
BnaA05g33770D
BnaA05g33770D protein.
  
   
 0.569
BnaC05g48910D
BnaC05g48910D protein.
  
   
 0.569
BnaA10g13590D
BnaA10g13590D protein.
  
   
 0.559
BnaC09g36060D
BnaC09g36060D protein.
  
   
 0.553
BnaA02g06100D
BnaA02g06100D protein.
  
   
 0.548
BnaA02g13730D
BnaA02g13730D protein.
  
   
 0.540
BnaA06g11070D
BnaA06g11070D protein.
  
     0.524
BnaAnng36570D
BnaAnng36570D protein.
  
     0.519
BnaCnng73990D
BnaCnng73990D protein.
  
     0.518
BnaC09g41280D
BnaC09g41280D protein.
  
     0.514
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.