Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g12940DBnaA01g12940D protein. (672 aa)    
Predicted Functional Partners:
BnaC03g40790D
BnaC03g40790D protein.
  
 0.709
BnaA01g26270D
BnaA01g26270D protein.
  
 0.705
BnaC04g51710D
BnaC04g51710D protein.
  
 0.637
BnaA04g26710D
BnaA04g26710D protein.
  
 0.637
BnaC04g00730D
BnaC04g00730D protein.
   
 0.560
BnaA08g12990D
BnaA08g12990D protein.
    
 0.518
BnaAnng37940D
BnaAnng37940D protein.
    
 0.518
BnaA07g00650D
BnaA07g00650D protein.
    
  0.409
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.