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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng10610DBnaCnng10610D protein. (632 aa)    
Predicted Functional Partners:
BnaA10g12020D
BnaA10g12020D protein.
    
0.728
BnaA01g08290D
BnaA01g08290D protein.
    
0.728
BnaC01g09840D
BnaC01g09840D protein.
    
0.728
BnaC09g33710D
BnaC09g33710D protein.
    
0.728
BnaC03g12470D
BnaC03g12470D protein.
    
0.728
BnaA05g28190D
BnaA05g28190D protein.
   
 0.632
BnaAnng29420D
BnaAnng29420D protein.
   
 0.632
BnaA09g40430D
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
  
 0.509
BnaA04g16210D
BnaA04g16210D protein.
   
 0.492
BnaA06g39700D
BnaA06g39700D protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
   
0.491
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.