STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g00560DBnaC02g00560D protein. (362 aa)    
Predicted Functional Partners:
BnaC09g12000D
BnaC09g12000D protein.
    
 0.866
BnaA09g11550D
BnaA09g11550D protein.
    
 0.866
BnaA08g14450D
BnaA08g14450D protein.
    
 0.773
BnaC08g12110D
BnaC08g12110D protein.
    
 0.773
BnaA02g23720D
BnaA02g23720D protein.
    
 0.698
BnaC04g47620D
BnaC04g47620D protein.
    
 0.679
BnaC04g01830D
BnaC04g01830D protein.
    
 0.679
BnaC04g24530D
BnaC04g24530D protein.
    
 0.663
BnaCnng07590D
BnaCnng07590D protein.
    
 0.663
BnaC02g38200D
BnaC02g38200D protein.
    
 0.663
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.