STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g15280DBnaA09g15280D protein. (277 aa)    
Predicted Functional Partners:
BnaC03g66580D
BnaC03g66580D protein.
  
 
 
0.637
BnaA04g14070D
BnaA04g14070D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 
0.556
BnaA08g11770D
BnaA08g11770D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 
0.556
BnaA03g52520D
BnaA03g52520D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 
0.556
BnaAnng09800D
BnaAnng09800D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 
0.556
BnaC04g44540D
BnaC04g44540D protein.
  
 
  0.536
BnaA09g16330D
BnaA09g16330D protein.
  
 
  0.529
BnaA06g12210D
BnaA06g12210D protein.
  
    0.526
BnaC04g11640D
BnaC04g11640D protein.
  
    0.517
BnaCnng04870D
BnaCnng04870D protein.
  
 
   0.517
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.