close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g41580DBnaC02g41580D protein. (514 aa)    
Predicted Functional Partners:
BnaA09g03360D
BnaA09g03360D protein.
   
 0.493
BnaCnng02620D
BnaCnng02620D protein.
    
 0.458
BnaA06g20570D
BnaA06g20570D protein.
   
 0.428
BnaA07g00650D
BnaA07g00650D protein.
   
0.428
BnaCnng15180D
BnaCnng15180D protein.
   
 0.428
BnaA09g02460D
BnaA09g02460D protein.
   
 0.426
BnaCnng49330D
BnaCnng49330D protein.
   
 0.426
BnaA04g05850D
BnaA04g05850D protein.
   
0.425
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.