Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g28500DBnaA09g28500D protein. (609 aa)    
Predicted Functional Partners:
BnaA09g54550D
BnaA09g54550D protein.
      
 0.552
BnaC05g50720D
BnaC05g50720D protein.
      
 0.552
BnaAnng19900D
BnaAnng19900D protein; Belongs to the protein kinase superfamily.
  
 
  0.482
BnaC06g27080D
BnaC06g27080D protein.
  
 
  0.480
BnaC03g13390D
BnaC03g13390D protein; Belongs to the protein kinase superfamily.
  
 
  0.470
BnaC09g31820D
BnaC09g31820D protein; Belongs to the protein kinase superfamily.
  
  
  0.465
BnaC05g22070D
BnaC05g22070D protein.
      
 0.463
BnaA08g14260D
Mitogen-activated protein kinase kinase kinase 16.1; Belongs to the protein kinase superfamily.
  
  
  0.462
BnaA10g09350D
BnaA10g09350D protein; Belongs to the protein kinase superfamily.
  
  
  0.460
BnaC01g19100D
BnaC01g19100D protein.
  
  
  0.459
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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