STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC05g43130DBnaC05g43130D protein. (249 aa)    
Predicted Functional Partners:
BnaA06g33370D
BnaA06g33370D protein.
   
 0.726
BnaCnng04640D
BnaCnng04640D protein.
   
 0.726
BnaCnng04650D
BnaCnng04650D protein.
   
 0.726
BnaC09g37810D
BnaC09g37810D protein.
   
 0.726
BnaA08g19440D
BnaA08g19440D protein.
   
 0.726
BnaC09g21590D
BnaC09g21590D protein.
   
 0.726
BnaA09g28590D
BnaA09g28590D protein.
   
 0.726
BnaCnng16920D
BnaCnng16920D protein.
   
 0.726
BnaA07g37150D
BnaA07g37150D protein.
   
 0.726
BnaAnng30450D
BnaAnng30450D protein.
   
 0.726
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.