Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA04g26090D | BnaA05g30990D | A0A078HH62 | A0A078GDT9 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | BnaA05g30990D protein. | 0.520 |
BnaA04g26090D | BnaA07g24300D | A0A078HH62 | A0A078F1R8 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Chorismate mutase. | 0.773 |
BnaA04g26090D | BnaA09g02570D | A0A078HH62 | A0A078G3K2 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Chorismate mutase. | 0.773 |
BnaA04g26090D | BnaAnng03180D | A0A078HH62 | A0A078G2G2 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | BnaAnng03180D protein. | 0.519 |
BnaA04g26090D | BnaAnng27440D | A0A078HH62 | A0A078JSU1 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.900 |
BnaA04g26090D | BnaC01g00420D | A0A078HH62 | A0A078HVZ5 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | BnaC01g00420D protein. | 0.973 |
BnaA04g26090D | BnaC02g00030D | A0A078HH62 | A0A078HQM7 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Chorismate mutase. | 0.787 |
BnaA04g26090D | BnaC03g34680D | A0A078HH62 | A0A078F0U2 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | BnaC03g34680D protein. | 0.517 |
BnaA04g26090D | BnaC04g56880D | A0A078HH62 | A0A078J1K1 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.900 |
BnaA04g26090D | BnaC06g30540D | A0A078HH62 | A0A078HT56 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Chorismate mutase. | 0.773 |
BnaA05g30990D | BnaA04g26090D | A0A078GDT9 | A0A078HH62 | BnaA05g30990D protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.520 |
BnaA05g30990D | BnaA07g24300D | A0A078GDT9 | A0A078F1R8 | BnaA05g30990D protein. | Chorismate mutase. | 0.759 |
BnaA05g30990D | BnaA09g02570D | A0A078GDT9 | A0A078G3K2 | BnaA05g30990D protein. | Chorismate mutase. | 0.774 |
BnaA05g30990D | BnaAnng03180D | A0A078GDT9 | A0A078G2G2 | BnaA05g30990D protein. | BnaAnng03180D protein. | 0.900 |
BnaA05g30990D | BnaAnng27440D | A0A078GDT9 | A0A078JSU1 | BnaA05g30990D protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.519 |
BnaA05g30990D | BnaC01g00420D | A0A078GDT9 | A0A078HVZ5 | BnaA05g30990D protein. | BnaC01g00420D protein. | 0.983 |
BnaA05g30990D | BnaC02g00030D | A0A078GDT9 | A0A078HQM7 | BnaA05g30990D protein. | Chorismate mutase. | 0.802 |
BnaA05g30990D | BnaC03g34680D | A0A078GDT9 | A0A078F0U2 | BnaA05g30990D protein. | BnaC03g34680D protein. | 0.901 |
BnaA05g30990D | BnaC04g56880D | A0A078GDT9 | A0A078J1K1 | BnaA05g30990D protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.520 |
BnaA05g30990D | BnaC06g30540D | A0A078GDT9 | A0A078HT56 | BnaA05g30990D protein. | Chorismate mutase. | 0.759 |
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