STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC05g43510DBnaC05g43510D protein. (122 aa)    
Predicted Functional Partners:
BnaAnng32060D
BnaAnng32060D protein.
   
 0.983
BnaC04g03420D
BnaC04g03420D protein.
   
 0.977
BnaA07g03400D
BnaA07g03400D protein.
   
 0.975
BnaA01g21530D
BnaA01g21530D protein.
   
 0.960
BnaC01g27460D
BnaC01g27460D protein.
   
 0.960
BnaC03g64040D
BnaC03g64040D protein.
  
 
 0.941
BnaA07g00210D
BnaA07g00210D protein.
   
 0.932
BnaA01g26490D
BnaA01g26490D protein.
    
 
 0.919
BnaA05g17840D
BnaA05g17840D protein.
    
 0.901
BnaC05g00630D
BnaC05g00630D protein.
    
 0.899
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.