STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g18420DBnaA09g18420D protein. (209 aa)    
Predicted Functional Partners:
BnaA08g26690D
BnaA08g26690D protein.
  
 0.894
BnaCnng06510D
BnaCnng06510D protein.
  
 0.892
BnaC08g42880D
BnaC08g42880D protein.
  
 0.891
BnaA05g09110D
BnaA05g09110D protein.
  
 0.844
BnaA10g29990D
BnaA10g29990D protein.
  
 0.841
BnaC01g37260D
BnaC01g37260D protein.
  
 0.840
BnaA06g16420D
BnaA06g16420D protein.
  
 0.839
BnaA01g29650D
BnaA01g29650D protein.
  
 0.836
BnaCnng15880D
BnaCnng15880D protein.
  
 0.832
BnaAnng22700D
BnaAnng22700D protein.
  
 0.831
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.